Probably rather a problem of your crashing encrypted file system than of aMule. Maybe it doesn't commit the changes (deletion of the temp files after hashing) anymore.
Please check your logfiles for the entries
AddLogLineM(true, CFormat( _("Unexpected error while completing %s. File paused") )% GetFileName()
AddLogLineM(true, CFormat( _("Finished downloading: %s") ) % GetFileName() );
(and make sure your logfile isn't on that file system too).
No, its not a problem of my encryptet FS.
The aMule crash was a programm freeze, I rebootet because amuled was a zombie.
Und the other crashes was complete system freezes.
My system ist very slow and massive CPU usage causes such problems.
And the problem is that the hashed files where not finisched if there are other files to hash in the meantime.
Only after hashing ALL files ALL files where finished together.
My FS is mounted with short commit time (5 seconds) and with data=ordered.